Serialized Form


Package ij

Class ij.ImageJ extends java.awt.Frame implements Serializable

Serialized Fields

toolbar

Toolbar toolbar

statusBar

java.awt.Panel statusBar

progressBar

ProgressBar progressBar

statusLine

java.awt.Label statusLine

firstTime

boolean firstTime

applet

java.applet.Applet applet

classes

java.util.Vector<E> classes

exitWhenQuitting

boolean exitWhenQuitting

quitting

boolean quitting

keyPressedTime

long keyPressedTime

actionPerformedTime

long actionPerformedTime

hotkey

boolean hotkey

Class ij.ImageJApplet extends java.applet.Applet implements Serializable


Package ij.gui

Class ij.gui.FreehandRoi extends PolygonRoi implements Serializable

Class ij.gui.GenericDialog extends java.awt.Dialog implements Serializable

Serialized Fields

numberField

java.util.Vector<E> numberField

stringField

java.util.Vector<E> stringField

checkbox

java.util.Vector<E> checkbox

choice

java.util.Vector<E> choice

slider

java.util.Vector<E> slider

textArea1

java.awt.TextArea textArea1

textArea2

java.awt.TextArea textArea2

defaultValues

java.util.Vector<E> defaultValues

defaultText

java.util.Vector<E> defaultText

theLabel

java.awt.Component theLabel

cancel

java.awt.Button cancel

okay

java.awt.Button okay

wasCanceled

boolean wasCanceled

y

int y

nfIndex

int nfIndex

sfIndex

int sfIndex

cbIndex

int cbIndex

choiceIndex

int choiceIndex

grid

java.awt.GridBagLayout grid

c

java.awt.GridBagConstraints c

firstNumericField

boolean firstNumericField

firstSlider

boolean firstSlider

invalidNumber

boolean invalidNumber

errorMessage

java.lang.String errorMessage

firstPaint

boolean firstPaint

labels

java.util.Hashtable<K,V> labels

macro

boolean macro

macroOptions

java.lang.String macroOptions

topInset

int topInset

leftInset

int leftInset

bottomInset

int bottomInset

customInsets

boolean customInsets

sliderIndexes

int[] sliderIndexes

Class ij.gui.HistogramWindow extends ImageWindow implements Serializable

Serialized Fields

stats

ImageStatistics stats

histogram

int[] histogram

lut

LookUpTable lut

frame

java.awt.Rectangle frame

list

java.awt.Button list

save

java.awt.Button save

copy

java.awt.Button copy

log

java.awt.Button log

value

java.awt.Label value

count

java.awt.Label count

decimalPlaces

int decimalPlaces

digits

int digits

newMaxCount

int newMaxCount

plotScale

int plotScale

logScale

boolean logScale

cal

Calibration cal

yMax

int yMax

Class ij.gui.HTMLDialog extends javax.swing.JDialog implements Serializable

Class ij.gui.ImageCanvas extends java.awt.Canvas implements Serializable

Serialized Fields

imp

ImagePlus imp

imageUpdated

boolean imageUpdated

srcRect

java.awt.Rectangle srcRect

imageWidth

int imageWidth

imageHeight

int imageHeight

xMouse

int xMouse

yMouse

int yMouse

showCursorStatus

boolean showCursorStatus

sx2

int sx2

sy2

int sy2

disablePopupMenu

boolean disablePopupMenu

showAllROIs

boolean showAllROIs

labelRects

java.awt.Rectangle[] labelRects

maxBoundsReset

boolean maxBoundsReset

ij

ImageJ ij

magnification

double magnification

dstWidth

int dstWidth

dstHeight

int dstHeight

xMouseStart

int xMouseStart

yMouseStart

int yMouseStart

xSrcStart

int xSrcStart

ySrcStart

int ySrcStart

flags

int flags

offScreenImage

java.awt.Image offScreenImage

offScreenWidth

int offScreenWidth

offScreenHeight

int offScreenHeight

firstFrame

long firstFrame

frames

int frames

fps

int fps

count

int count

Class ij.gui.ImageWindow extends java.awt.Frame implements Serializable

Serialized Fields

imp

ImagePlus imp

ij

ImageJ ij

ic

ImageCanvas ic

initialMagnification

double initialMagnification

newWidth

int newWidth

newHeight

int newHeight

closed

boolean closed

newCanvas

boolean newCanvas

maxBounds

java.awt.Rectangle maxBounds

textGap

int textGap

running

boolean running
This variable is set false if the user presses the escape key or closes the window.


running2

boolean running2
This variable is set false if the user clicks in this window, presses the escape key, or closes the window.

Class ij.gui.Line extends Roi implements Serializable

Serialized Fields

x1

int x1

y1

int y1

x2

int x2

y2

int y2

x1d

double x1d

y1d

double y1d

x2d

double x2d

y2d

double y2d

x1R

double x1R

y1R

double y1R

x2R

double x2R

y2R

double y2R

xHandleOffset

double xHandleOffset

yHandleOffset

double yHandleOffset

startxd

double startxd

startyd

double startyd

Class ij.gui.MessageDialog extends java.awt.Dialog implements Serializable

Serialized Fields

button

java.awt.Button button

label

MultiLineLabel label

Class ij.gui.MultiLineLabel extends java.awt.Canvas implements Serializable

Serialized Fields

lines

java.lang.String[] lines

num_lines

int num_lines

margin_width

int margin_width

margin_height

int margin_height

line_height

int line_height

line_ascent

int line_ascent

line_widths

int[] line_widths

max_width

int max_width

Class ij.gui.OvalRoi extends Roi implements Serializable

Class ij.gui.PlotWindow extends ImageWindow implements Serializable

Serialized Fields

list

java.awt.Button list

save

java.awt.Button save

copy

java.awt.Button copy

coordinates

java.awt.Label coordinates

font

java.awt.Font font

defaultDigits

int defaultDigits

realNumbers

boolean realNumbers

xdigits

int xdigits

ydigits

int ydigits

markSize

int markSize

plot

Plot plot

Class ij.gui.PointRoi extends PolygonRoi implements Serializable

Class ij.gui.PolygonRoi extends Roi implements Serializable

Serialized Fields

maxPoints

int maxPoints

xp

int[] xp

yp

int[] yp

xp2

int[] xp2

yp2

int[] yp2

nPoints

int nPoints

xSpline

int[] xSpline

ySpline

int[] ySpline

xScreenSpline

int[] xScreenSpline

yScreenSpline

int[] yScreenSpline

splinePoints

int splinePoints

clip

java.awt.Rectangle clip

angle1

double angle1

degrees

double degrees

xClipMin

int xClipMin

yClipMin

int yClipMin

xClipMax

int xClipMax

yClipMax

int yClipMax

userCreated

boolean userCreated

mouseUpTime

long mouseUpTime

Class ij.gui.ProgressBar extends java.awt.Canvas implements Serializable

Serialized Fields

canvasWidth

int canvasWidth

canvasHeight

int canvasHeight

x

int x

y

int y

width

int width

height

int height

percent

double percent

startTime

long startTime

count

int count

showBar

boolean showBar

negativeProgress

boolean negativeProgress

barColor

java.awt.Color barColor

fillColor

java.awt.Color fillColor

backgroundColor

java.awt.Color backgroundColor

frameBrighter

java.awt.Color frameBrighter

frameDarker

java.awt.Color frameDarker

Class ij.gui.Roi extends java.lang.Object implements Serializable

Serialized Fields

startX

int startX

startY

int startY

x

int x

y

int y

width

int width

height

int height

activeHandle

int activeHandle

state

int state

modState

int modState

type

int type

xMax

int xMax

yMax

int yMax

imp

ImagePlus imp

ic

ImageCanvas ic

oldX

int oldX

oldY

int oldY

oldWidth

int oldWidth

oldHeight

int oldHeight

clipX

int clipX

clipY

int clipY

clipWidth

int clipWidth

clipHeight

int clipHeight

clipboard

ImagePlus clipboard

constrain

boolean constrain

center

boolean center

updateFullWindow

boolean updateFullWindow

mag

double mag

name

java.lang.String name

cachedMask

ImageProcessor cachedMask

handleColor

java.awt.Color handleColor

Class ij.gui.SaveChangesDialog extends java.awt.Dialog implements Serializable

Serialized Fields

dontSave

java.awt.Button dontSave

cancel

java.awt.Button cancel

save

java.awt.Button save

cancelPressed

boolean cancelPressed

savePressed

boolean savePressed

Class ij.gui.ShapeRoi extends Roi implements Serializable

Serialized Fields

shape

java.awt.Shape shape
The java.awt.Shape encapsulated by this object.


maxerror

double maxerror
The instance value of the maximum tolerance (MAXERROR) allowed in calculating the length of the curve segments of this ROI's shape.


flatness

double flatness
The instance value of the coefficient (FLATNESS) used to obtain a flattened version of this ROI's shape.


maxPoly

int maxPoly
The instance value of MAXPOLY.


flatten

boolean flatten
If true then methods that manipulate this ROI's shape will work on a flattened version of the shape.


forceTrace

boolean forceTrace
Flag which specifies how Roi objects will be constructed from closed (sub)paths having more than MAXPOLY and composed exclusively of line segments. If true then (sub)path will be parsed into a Roi.TRACED_ROI; else, into a Roi.FREEROI.


forceAngle

boolean forceAngle
Flag which specifies if Roi objects constructed from open (sub)paths composed of only two line segments will be of type Roi.ANGLE. If true then (sub)path will be parsed into a Roi.ANGLE; else, into a Roi.POLYLINE.


savedRois

java.util.Vector<E> savedRois

Class ij.gui.StackWindow extends ImageWindow implements Serializable

Serialized Fields

sliceSelector

java.awt.Scrollbar sliceSelector

thread

java.lang.Thread thread

done

boolean done

slice

int slice

Class ij.gui.TextRoi extends Roi implements Serializable

Serialized Fields

theText

java.lang.String[] theText

previousMag

double previousMag

firstChar

boolean firstChar

firstMouseUp

boolean firstMouseUp

cline

int cline

Class ij.gui.Toolbar extends java.awt.Canvas implements Serializable

Serialized Fields

ps

java.awt.Dimension ps

down

boolean[] down

previous

int previous

x

int x

y

int y

xOffset

int xOffset

yOffset

int yOffset

mouseDownTime

long mouseDownTime

g

java.awt.Graphics g

mpPrevious

int mpPrevious

names

java.lang.String[] names

icons

java.lang.String[] icons

menus

java.awt.PopupMenu[] menus

pc

int pc

icon

java.lang.String icon

macroInstaller

MacroInstaller macroInstaller

startupTime

int startupTime

ovalPopup

java.awt.PopupMenu ovalPopup

linePopup

java.awt.PopupMenu linePopup

switchPopup

java.awt.PopupMenu switchPopup

ovalItem

java.awt.CheckboxMenuItem ovalItem

brushItem

java.awt.CheckboxMenuItem brushItem

straightLineItem

java.awt.CheckboxMenuItem straightLineItem

polyLineItem

java.awt.CheckboxMenuItem polyLineItem

freeLineItem

java.awt.CheckboxMenuItem freeLineItem

currentSet

java.lang.String currentSet

lineType

int lineType

gray

java.awt.Color gray

brighter

java.awt.Color brighter

darker

java.awt.Color darker

evenDarker

java.awt.Color evenDarker

triangleColor

java.awt.Color triangleColor

toolColor

java.awt.Color toolColor

Class ij.gui.TrimmedButton extends java.awt.Button implements Serializable

Serialized Fields

trim

int trim

Class ij.gui.YesNoCancelDialog extends java.awt.Dialog implements Serializable

Serialized Fields

yesB

java.awt.Button yesB

noB

java.awt.Button noB

cancelB

java.awt.Button cancelB

cancelPressed

boolean cancelPressed

yesPressed

boolean yesPressed

firstPaint

boolean firstPaint

Package ij.plugin.frame

Class ij.plugin.frame.ContrastAdjuster extends PlugInFrame implements Serializable

Serialized Fields

plot

ij.plugin.frame.ContrastPlot plot

thread

java.lang.Thread thread

minSliderValue

int minSliderValue

maxSliderValue

int maxSliderValue

brightnessValue

int brightnessValue

contrastValue

int contrastValue

sliderRange

int sliderRange

doAutoAdjust

boolean doAutoAdjust

doReset

boolean doReset

doSet

boolean doSet

doApplyLut

boolean doApplyLut

panel

java.awt.Panel panel

tPanel

java.awt.Panel tPanel

autoB

java.awt.Button autoB

resetB

java.awt.Button resetB

setB

java.awt.Button setB

applyB

java.awt.Button applyB

previousImageID

int previousImageID

previousType

int previousType

previousSnapshot

java.lang.Object previousSnapshot

ij

ImageJ ij

min

double min

max

double max

previousMin

double previousMin

previousMax

double previousMax

defaultMin

double defaultMin

defaultMax

double defaultMax

contrast

int contrast

brightness

int brightness

RGBImage

boolean RGBImage

minSlider

java.awt.Scrollbar minSlider

maxSlider

java.awt.Scrollbar maxSlider

contrastSlider

java.awt.Scrollbar contrastSlider

brightnessSlider

java.awt.Scrollbar brightnessSlider

minLabel

java.awt.Label minLabel

maxLabel

java.awt.Label maxLabel

windowLabel

java.awt.Label windowLabel

levelLabel

java.awt.Label levelLabel

done

boolean done

autoThreshold

int autoThreshold

gridbag

java.awt.GridBagLayout gridbag

c

java.awt.GridBagConstraints c

y

int y

windowLevel

boolean windowLevel

balance

boolean balance

monoFont

java.awt.Font monoFont

sanFont

java.awt.Font sanFont

channels

int channels

choice

java.awt.Choice choice

Class ij.plugin.frame.Editor extends PlugInFrame implements Serializable

Serialized Fields

ta

java.awt.TextArea ta

path

java.lang.String path

changes

boolean changes

fileMenu

java.awt.Menu fileMenu

editMenu

java.awt.Menu editMenu

p

java.util.Properties p

macroStarts

int[] macroStarts

macroNames

java.lang.String[] macroNames

mb

java.awt.MenuBar mb

macrosMenu

java.awt.Menu macrosMenu

nMacros

int nMacros

pgm

Program pgm

eventCount

int eventCount

shortcutsInUse

java.lang.String shortcutsInUse

inUseCount

int inUseCount

installer

MacroInstaller installer

dontShowWindow

boolean dontShowWindow

sizes

int[] sizes

fontSize

int fontSize

monospaced

java.awt.CheckboxMenuItem monospaced

Class ij.plugin.frame.Fitter extends PlugInFrame implements Serializable

Serialized Fields

fit

java.awt.Choice fit

doIt

java.awt.Button doIt

open

java.awt.Button open

apply

java.awt.Button apply

settings

java.awt.Checkbox settings

fitTypeStr

java.lang.String fitTypeStr

textArea

java.awt.TextArea textArea

dx

double[] dx

dy

double[] dy

x

double[] x

y

double[] y

Class ij.plugin.frame.Fonts extends PlugInFrame implements Serializable

Serialized Fields

panel

java.awt.Panel panel

font

java.awt.Choice font

size

java.awt.Choice size

style

java.awt.Choice style

Class ij.plugin.frame.LineWidthAdjuster extends PlugInFrame implements Serializable

Serialized Fields

sliderRange

int sliderRange

slider

java.awt.Scrollbar slider

value

int value

setText

boolean setText

thread

java.lang.Thread thread

done

boolean done

tf

java.awt.TextField tf

Class ij.plugin.frame.PasteController extends PlugInFrame implements Serializable

Serialized Fields

panel

java.awt.Panel panel

pasteMode

java.awt.Choice pasteMode

Class ij.plugin.frame.PlugInFrame extends java.awt.Frame implements Serializable

Serialized Fields

title

java.lang.String title

Class ij.plugin.frame.Recorder extends PlugInFrame implements Serializable

Serialized Fields

makeMacro

java.awt.Button makeMacro

help

java.awt.Button help

macroName

java.awt.TextField macroName

fitTypeStr

java.lang.String fitTypeStr

Class ij.plugin.frame.RoiManager extends PlugInFrame implements Serializable

Serialized Fields

panel

java.awt.Panel panel

list

java.awt.List list

rois

java.util.Hashtable<K,V> rois

roiCopy

Roi roiCopy

canceled

boolean canceled

macro

boolean macro

ignoreInterrupts

boolean ignoreInterrupts

pm

java.awt.PopupMenu pm

moreButton

java.awt.Button moreButton

Class ij.plugin.frame.ThresholdAdjuster extends PlugInFrame implements Serializable

Serialized Fields

plot

ij.plugin.frame.ThresholdPlot plot

thread

java.lang.Thread thread

minValue

int minValue

maxValue

int maxValue

sliderRange

int sliderRange

doAutoAdjust

boolean doAutoAdjust

doReset

boolean doReset

doApplyLut

boolean doApplyLut

doStateChange

boolean doStateChange

doSet

boolean doSet

panel

java.awt.Panel panel

autoB

java.awt.Button autoB

resetB

java.awt.Button resetB

applyB

java.awt.Button applyB

setB

java.awt.Button setB

previousImageID

int previousImageID

previousImageType

int previousImageType

previousMin

double previousMin

previousMax

double previousMax

ij

ImageJ ij

minThreshold

double minThreshold

maxThreshold

double maxThreshold

minSlider

java.awt.Scrollbar minSlider

maxSlider

java.awt.Scrollbar maxSlider

label1

java.awt.Label label1

label2

java.awt.Label label2

done

boolean done

invertedLut

boolean invertedLut

lutColor

int lutColor

firstActivation

boolean firstActivation

Package ij.text

Class ij.text.TextPanel extends java.awt.Panel implements Serializable

Serialized Fields

iGridWidth

int iGridWidth

iGridHeight

int iGridHeight

iX

int iX

iY

int iY

sColHead

java.lang.String[] sColHead

vData

java.util.Vector<E> vData

iColWidth

int[] iColWidth

iColCount

int iColCount

iRowCount

int iRowCount

iRowHeight

int iRowHeight

iFirstRow

int iFirstRow

sbHoriz

java.awt.Scrollbar sbHoriz

sbVert

java.awt.Scrollbar sbVert

iSbWidth

int iSbWidth

iSbHeight

int iSbHeight

bDrag

boolean bDrag

iXDrag

int iXDrag

iColDrag

int iColDrag

headings

boolean headings

title

java.lang.String title

labels

java.lang.String labels

keyListener

java.awt.event.KeyListener keyListener

resizeCursor

java.awt.Cursor resizeCursor

defaultCursor

java.awt.Cursor defaultCursor

selStart

int selStart

selEnd

int selEnd

selOrigin

int selOrigin

selLine

int selLine

tc

ij.text.TextCanvas tc

pm

java.awt.PopupMenu pm

columnsManuallyAdjusted

boolean columnsManuallyAdjusted

mouseDownTime

long mouseDownTime

filePath

java.lang.String filePath

rt

ResultsTable rt

unsavedLines

boolean unsavedLines

Class ij.text.TextWindow extends java.awt.Frame implements Serializable

Serialized Fields

textPanel

TextPanel textPanel

antialiased

java.awt.CheckboxMenuItem antialiased

sizes

int[] sizes

fontSize

int fontSize

Package nom.tam.fits

Class nom.tam.fits.BadHeaderException extends FitsException implements Serializable

Class nom.tam.fits.FitsException extends java.lang.Exception implements Serializable

Class nom.tam.fits.HeaderCardException extends FitsException implements Serializable

Class nom.tam.fits.TruncatedFileException extends FitsException implements Serializable


Package nom.tam.util

Class nom.tam.util.FormatException extends java.lang.Exception implements Serializable

Class nom.tam.util.TableException extends java.lang.Exception implements Serializable

Class nom.tam.util.TruncationException extends java.lang.Exception implements Serializable


Package skyview

Package skyview.data

Class skyview.data.BoxSmoother extends java.lang.Object implements Serializable

Serialized Fields

nx

int nx
Width of box


ny

int ny

width

int width
Width of image


height

int height
Height of image


depth

int depth
Depth of image


data

double[] data
Image data


xdata

double[] xdata
Working data


Package skyview.geometry

Class skyview.geometry.Converter extends Transformer implements Serializable

Serialized Fields

components

java.util.ArrayList<E> components

compArr

Transformer[] compArr

datArr

double[][] datArr

d2

double[] d2

d3

double[] d3

checked

boolean checked

Class skyview.geometry.CoordinateSystem extends java.lang.Object implements Serializable

Class skyview.geometry.Deprojecter extends Transformer implements Serializable

Class skyview.geometry.DepthSampler extends java.lang.Object implements Serializable

Serialized Fields

zero

double zero
The starting value for first output bin (first input bin goes from 0-1)


delta

double delta
The size of each output bin (in input bins)


n

int n
The number of output bins

Class skyview.geometry.Distorter extends Transformer implements Serializable

Class skyview.geometry.Projecter extends Transformer implements Serializable

Class skyview.geometry.Rotater extends Transformer implements Serializable

Serialized Fields

matrix

double[][] matrix
The matrix coefficients.


transRot

Rotater transRot
The transpose coefficients.


temp

double[] temp
Temporary for when data is aliased.

Class skyview.geometry.Sampler extends java.lang.Object implements Serializable

Serialized Fields

inImage

Image inImage
The input image. It should have a size inHeight*inWidth*inDepth


inHeight

int inHeight

inWidth

int inWidth

inDepth

int inDepth

bounds

int[] bounds
This gives the minX,maxX, minY,maxY pixel values for the current output image. We can use this to limit the region of the input image we are interested in.


outImage

Image outImage
The output image. It should have a size outHeight*outWidth*outDepth


outHeight

int outHeight

outWidth

int outWidth

outDepth

int outDepth

trans

Transformer trans
The transformation from the output image to the input image.

Class skyview.geometry.Scaler extends Transformer implements Serializable

Serialized Fields

x0

double x0
Parameters of the transformation


y0

double y0

a00

double a00

a01

double a01

a10

double a10

a11

double a11

Class skyview.geometry.SphereDistorter extends Transformer implements Serializable

Class skyview.geometry.TransformationException extends java.lang.Exception implements Serializable

Class skyview.geometry.Transformer extends java.lang.Object implements Serializable

Serialized Fields

t2

double[] t2
Temporaries that may be used in the conversion. The use of these temporaries makes the Trasnformer classes non Thread safe. These temporaries are used rather than creating new arrays for multiple invocations.


t3

double[] t3

Class skyview.geometry.WCS extends Converter implements Serializable

Serialized Fields

wcsScale

double wcsScale
This includes a nominal 'scale' for the WCS. While this can often be calculated from the transformation, that may sometimes be difficult.


csys

CoordinateSystem csys
The coordinate system used in the WCS.


proj

Projection proj
The Projection used in the WCS.


distort

Distorter distort
The linear distorter used in the WCS.


scale

Scaler scale
The scaler used in the WCS.


headerNaxis

int[] headerNaxis
The size of the image if a WCS is generated from a FIS header


stdWCS

boolean stdWCS
Is this a standards WCS


wcsKeys

java.util.HashMap<K,V> wcsKeys

lonAxis

int lonAxis
Which axis is the longitude


latAxis

int latAxis
Which axis is the latitude


h

Header h
The FITS header


Package skyview.geometry.csys

Class skyview.geometry.csys.BesselianCoordinateSystem extends CoordinateSystem implements Serializable

Serialized Fields

epoch

double epoch

Class skyview.geometry.csys.EclipticCoordinateSystem extends CoordinateSystem implements Serializable

Serialized Fields

epoch

double epoch

elon

double elon

Class skyview.geometry.csys.GalacticCoordinateSystem extends CoordinateSystem implements Serializable

Class skyview.geometry.csys.HelioeclipticCoordinateSystem extends EclipticCoordinateSystem implements Serializable

Serialized Fields

epoch

double epoch

Class skyview.geometry.csys.ICRSCoordinateSystem extends CoordinateSystem implements Serializable

Class skyview.geometry.csys.JulianCoordinateSystem extends CoordinateSystem implements Serializable

Serialized Fields

epoch

double epoch

Package skyview.geometry.distorter

Class skyview.geometry.distorter.DSSDistorter extends Distorter implements Serializable

Serialized Fields

CONS2R

double CONS2R

COND2R

double COND2R

TWOPI

double TWOPI

TOLERANCE

double TOLERANCE

xmm

double xmm

ymm

double ymm

xy

double xy

x2

double x2

y2

double y2

x2y

double x2y

y2x

double y2x

x2y2

double x2y2

x4y4

double x4y4

x3

double x3

y3

double y3

x4

double x4

y4

double y4

plate_ra

double plate_ra

plate_dec

double plate_dec

plate_scale

double plate_scale

x_pixel_size

double x_pixel_size

y_pixel_size

double y_pixel_size

ppo_coeff

double[] ppo_coeff

x_coeff

double[] x_coeff

y_coeff

double[] y_coeff

Class skyview.geometry.distorter.DSSDistorter.DSSInvDistorter extends Distorter implements Serializable

Class skyview.geometry.distorter.NeatDistorter extends Distorter implements Serializable

Serialized Fields

x0

double x0

y0

double y0

scale

double scale

Class skyview.geometry.distorter.NeatDistorter.NeatInvDistorter extends Distorter implements Serializable


Package skyview.geometry.projecter

Class skyview.geometry.projecter.AitProjecter extends Projecter implements Serializable

Class skyview.geometry.projecter.AitProjecter.AitDeprojecter extends Deprojecter implements Serializable

Class skyview.geometry.projecter.ArcProjecter extends Projecter implements Serializable

Class skyview.geometry.projecter.ArcProjecter.ArcDeprojecter extends Deprojecter implements Serializable

Class skyview.geometry.projecter.CarProjecter extends Projecter implements Serializable

Class skyview.geometry.projecter.CarProjecter.CarDeprojecter extends Deprojecter implements Serializable

Class skyview.geometry.projecter.CscProjecter extends Projecter implements Serializable

Class skyview.geometry.projecter.CscProjecter.CscDeprojecter extends Deprojecter implements Serializable

Class skyview.geometry.projecter.HpxProjecter extends Projecter implements Serializable

Serialized Fields

H

double H

K

double K

thetaC

double thetaC

yC

double yC

Class skyview.geometry.projecter.HpxProjecter.HpxDeprojecter extends Deprojecter implements Serializable

Class skyview.geometry.projecter.SflProjecter extends Projecter implements Serializable

Class skyview.geometry.projecter.SflProjecter.SflDeprojecter extends Deprojecter implements Serializable

Class skyview.geometry.projecter.SinProjecter extends Projecter implements Serializable

Class skyview.geometry.projecter.SinProjecter.SinDeprojecter extends Deprojecter implements Serializable

Class skyview.geometry.projecter.StgProjecter extends Projecter implements Serializable

Class skyview.geometry.projecter.StgProjecter.TanDeprojecter extends Deprojecter implements Serializable

Class skyview.geometry.projecter.TanProjecter extends Projecter implements Serializable

Class skyview.geometry.projecter.TanProjecter.TanDeprojecter extends Deprojecter implements Serializable

Class skyview.geometry.projecter.ToaProjecter extends Projecter implements Serializable

Serialized Fields

minDelta

double minDelta

epsilon

double epsilon

gridLevel

int gridLevel
The requested grid level. A gridLevel >= 0 implies that we are using a grid.


gridX

int gridX
The X value of the bounding pixel.


gridY

int gridY
The Y value of the bounding pixel.


gridSub

int gridSub
The number of levels of subdivisions to divide the bounding pixel into.


gridDelta

double gridDelta
The delta associated with the grid


gridOffX

double gridOffX
The offsets associated with the grid


gridOffY

double gridOffY

nPix

double nPix
The size of the grid


gridValues

double[][][] gridValues
The precomputed grid of unit vector values


vec

double[] vec
Temporaries


tpos

double[] tpos

diagonal

boolean diagonal
Do we have sinister or dexter diagonals.


result

double[] result

copy

double[] copy

temp

double[][] temp

diagTem

double[] diagTem

Class skyview.geometry.projecter.ToaProjecter.ToaDeprojecter extends Deprojecter implements Serializable

Serialized Fields

result

double[] result

Class skyview.geometry.projecter.XtnProjecter extends TanProjecter implements Serializable

Class skyview.geometry.projecter.ZeaProjecter extends Projecter implements Serializable

Class skyview.geometry.projecter.ZeaProjecter.ZeaDeprojecter extends Deprojecter implements Serializable


Package skyview.geometry.sampler

Class skyview.geometry.sampler.ClipSampler extends Sampler implements Serializable

Serialized Fields

depthArray

double[] depthArray

drizzOffset

double drizzOffset
Drizzle offset


drizzArea

double drizzArea
Drizzle Area


tArea

double tArea
The area (in original image pixels) overlapped by the current pixel.


intensive

boolean intensive
Is this an intensive quantity?


rcX0

double[] rcX0

rcX1

double[] rcX1

rcY0

double[] rcY0

rcY1

double[] rcY1

psX1

double[] psX1

psY1

double[] psY1

corners

double[][] corners
Implement the sample function of the Sampler class. This function samples a single pixel.

Class skyview.geometry.sampler.ComboSampler extends Sampler implements Serializable

Serialized Fields

primary

Sampler primary

backup

Sampler backup

combo

java.lang.String combo

Class skyview.geometry.sampler.LanczosSampler extends Sampler implements Serializable

Serialized Fields

nLobe

int nLobe
The number of lobes in the window


out

double[] out

coef

double coef

coef2

double coef2

xw

double[] xw
Weights used internally


yw

double[] yw

Class skyview.geometry.sampler.LISampler extends Sampler implements Serializable

Serialized Fields

out

double[] out

Class skyview.geometry.sampler.NNSampler extends Sampler implements Serializable

Serialized Fields

out

double[] out

Class skyview.geometry.sampler.SplineSampler extends Sampler implements Serializable

Serialized Fields

zout

double[] zout

xmin

int xmin

ymin

int ymin

splineDegree

int splineDegree
The order of the spline


image

double[] image
A copy of the image that is transformed into the spline coefficients


xWeight

double[] xWeight

yWeight

double[] yWeight

xIndex

int[] xIndex

yIndex

int[] yIndex

Package skyview.geometry.spheredistorter

Class skyview.geometry.spheredistorter.BesselianDistorter extends SphereDistorter implements Serializable

Serialized Fields

v

double[] v
These two work arrays mean that this class is not thread safe. If multiple threads are to be used each thread needs its own coordinate system object.


t1

double[] t1

Class skyview.geometry.spheredistorter.BesselianDistorter.BesselianInverseDistorter extends SphereDistorter implements Serializable


Package skyview.ij

Class skyview.ij.IJProcessor extends java.lang.Object implements Serializable

Serialized Fields

headless

boolean headless

gridScale

double gridScale

grid

Gridder grid

ip

ImageProcessor ip

nx

int nx

ny

int ny

bi

java.awt.image.BufferedImage bi

userFont

java.awt.Font userFont

setUserFont

boolean setUserFont

output

Image output

Package skyview.process

Class skyview.process.BackupMosaicker extends Mosaicker implements Serializable

Serialized Fields

usedImageNames

java.util.ArrayList<E> usedImageNames

pos

Position pos

maxSize

double maxSize

mosaickers

java.util.ArrayList<E> mosaickers

Class skyview.process.Deedger extends java.lang.Object implements Serializable

Serialized Fields

stdDeedger

Processor stdDeedger
The object that will do all the work. This should be updated if a better deedger is available.

Class skyview.process.IDMosaic extends Mosaicker implements Serializable

Serialized Fields

usedImageNames

java.lang.String[] usedImageNames

counts

int[] counts

nocoverage

int nocoverage

nonphysical

int nonphysical

Class skyview.process.InfoPrint extends java.lang.Object implements Serializable

Class skyview.process.Mosaicker extends java.lang.Object implements Serializable

Serialized Fields

usedImageNames

java.util.ArrayList<E> usedImageNames

Package skyview.process.deedger

Class skyview.process.deedger.BoundaryAverage extends java.lang.Object implements Serializable

Serialized Fields

deltas

double[][] deltas
The matrix of edge shifts between images.


counts

int[][] counts
The matrix of the number of edge pixels between two images


totalCount

int totalCount
The total number of edge pixels


nImage

int nImage
The number of candidate source images


inputs

Image[] inputs
The source images


output

Image output
The image whose edges are to be removed.


source

int[] source
The array giving the source image for each pixel in the input image. Note that we don't care about the actual source images -- we already have the pixel values. We just want to locate where the edges are and know how to group the pixels for later adjustments.


nx

int nx
The dimesions of the image


ny

int ny

offsets

double[] offsets
The additive adjustment to be made to the image.

Class skyview.process.deedger.BoundaryMedian extends java.lang.Object implements Serializable

Serialized Fields

deltas

double[][] deltas
The matrix of edge shifts between images.


shifts

java.util.ArrayList<E>[][] shifts
The arrays of edge pixels


counts

int[][] counts
The matrix of the number of edge pixels between two images


totalCount

int totalCount
The total number of edge pixels


nImage

int nImage
The number of candidate source images


inputs

Image[] inputs
The source images


output

Image output
The image whose edges are to be removed.


source

int[] source
The array giving the source image for each pixel in the input image. Note that we don't care about the actual source images -- we already have the pixel values. We just want to locate where the edges are and know how to group the pixels for later adjustments.


nx

int nx
The dimesions of the image


ny

int ny

offsets

double[] offsets
The additive adjustment to be made to the image.

Class skyview.process.deedger.BoundaryMedianDSS2 extends java.lang.Object implements Serializable

Serialized Fields

deltas

double[][] deltas
The matrix of edge shifts between images.


shifts

java.util.ArrayList<E>[][] shifts
The arrays of edge pixels


counts

int[][] counts
The matrix of the number of edge pixels between two images


totalCount

int totalCount
The total number of edge pixels


nImage

int nImage
The number of candidate source images


rImage

int rImage
The number of distinct DSS images


inputs

Image[] inputs
The source images


output

Image output
The image whose edges are to be removed.


source

int[] source
The array giving the source image for each pixel in the input image. Note that we don't care about the actual source images -- we already have the pixel values. We just want to locate where the edges are and know how to group the pixels for later adjustments.


nx

int nx
The dimesions of the image


ny

int ny

offsets

double[] offsets
The additive adjustment to be made to the image.


realImage

int[] realImage
The index of the real image corresponding to the tile in the inputs array.

Class skyview.process.deedger.ImageMedian extends java.lang.Object implements Serializable

Serialized Fields

counts

int[] counts
The matrix of the number of edge pixels between two images


totalCount

int totalCount
The total number of edge pixels


nImage

int nImage
The number of candidate source images


inputs

Image[] inputs
The source images


output

Image output
The image whose edges are to be removed.


source

int[] source
The array giving the source image for each pixel in the input image.


nx

int nx
The dimesions of the image


ny

int ny

offsets

double[] offsets
The additive adjustment to be made to the image.


Package skyview.process.imagefinder

Class skyview.process.imagefinder.Corner extends java.lang.Object implements Serializable

Class skyview.process.imagefinder.Prefetcher extends java.lang.Object implements Serializable


Package skyview.request

Class skyview.request.HTMLWriter extends java.lang.Object implements Serializable

Class skyview.request.RGBWriter extends HTMLWriter implements Serializable


Package skyview.sia

Class skyview.sia.SIAWriter extends java.lang.Object implements Serializable


Package skyview.survey

Class skyview.survey.DSSImage extends Image implements Serializable

Serialized Fields

dssData

int[][] dssData

directory

java.lang.String directory

plate

java.lang.String plate

urlPrefixes

java.lang.String[] urlPrefixes

nTiles

int nTiles

tileSize

int tileSize

xSize

int xSize

ySize

int ySize

subimageCount

int subimageCount

dssIndex

int[] dssIndex

Class skyview.survey.FitsImage extends Image implements Serializable

Serialized Fields

fitsFile

java.lang.String fitsFile

fitsHeader

Header fitsHeader

Class skyview.survey.Image extends java.lang.Object implements Serializable

Serialized Fields

wcs

WCS wcs
The WCS describing the transformation from the reference sphere to pixel coordinates.


data

double[] data
The data in the image. It should have dimension nx*ny*nz


nx

int nx
The dimensions of the image. In pixel space the image occupies 0-nx, 0-ny.


ny

int ny
The dimensions of the image. In pixel space the image occupies 0-nx, 0-ny.


nz

int nz
The number of planes in the image.


iName

java.lang.String iName
An initial name


center

double[] center

corners

double[][] corners

Class skyview.survey.ParsingTermination extends java.lang.RuntimeException implements Serializable

Class skyview.survey.ProxyImage extends Image implements Serializable

Serialized Fields

realImage

Image realImage
The image that we are proxying for. If this is not null, we simple forward requests to this.


proxyImage

Image proxyImage
The approximate image


currentImage

Image currentImage
The image we are currently using


fac

ImageFactory fac
An image factory that can create the real image


spell

java.lang.String spell
The string the image factory needs to create the real image

Class skyview.survey.SurveyException extends java.lang.Exception implements Serializable

Class skyview.survey.UserSurvey extends java.lang.Object implements Serializable

Serialized Fields

files

java.lang.String[] files

Class skyview.survey.XMLSurvey extends java.lang.Object implements Serializable

Serialized Fields

xmlFile

java.lang.String xmlFile
The XML file that defines the survey


surveySize

double surveySize
The default size of images.


images

java.util.ArrayList<E> images
The list of image strings


Package skyview.vo

Class skyview.vo.CatalogPostProcessor extends java.lang.Object implements Serializable

Class skyview.vo.CatalogProcessor extends java.lang.Object implements Serializable

Serialized Fields

threads

java.util.ArrayList<E> threads

outputImage

Image outputImage

catalogs

java.lang.String[] catalogs

pixelsValid

boolean pixelsValid

cosRad

double cosRad

hasRad

boolean hasRad

centerUnit

double[] centerUnit

centerCoords

double[] centerCoords

pixLoc

java.util.ArrayList<E> pixLoc

symbols

java.util.ArrayList<E> symbols

ps

java.io.PrintStream ps